Documents
CHPC Report 2007 (final).pdf
CHPCReport_2007.pdf
allocations

usage
fall2004.piusage.html
fall2004.userusage.html
fall2005.projusage.html
fall2005.userusage.html
fall2006.projusage.html
fall2006.userusage.html
fall2007.projusage.html
fall2007.userusage.html
icebox_qtd_by_project.html
qtd_by_pi_sierra.html
qtd_by_proj.html
qtd_by_user.html
qtd_by_user_sierra.html
qtd_bypi_sierra.html
spr2005.acctusage.html
spr2005.icebox_project.html
spr2005.piusage.html
spr2005.userusage.html
spr2006.projusage.html
spr2006.userusage.html
spr2007.projusage.html
spr2007.userusage.html
sum2004.piusage.html
sum2004.userusage.html
sum2005.projusage.html
sum2005.userusage.html
sum2006.projusage.html
sum2006.userusage.html
sum2007.projusage.html
sum2007.userusage.html
win2005.acctusage.html
win2005.piusage.html
win2005.userusage.html
win2006.projusage.html
win2006.userusage.html
win2007.projusage.html
win2007.userusage.html
win2008.projusage.html
win2008.userusage.html

forms

logos

logofiles
chpc-withtxt-ltbg-color-lg.jpg
chpc-withtxt-ltbg-color-mac.tif
chpc-withtxt-ltbg-color-med.jpg
chpc-withtxt-ltbg-color-pc.tif
chpc-withtxt-ltbg-color-sm.jpg
chpc-withtxt-ltbg-color.eps
chpc-withtxt-trans-col-lg.gif
chpc-withtxt-trans-col-med.gif
chpc-withtxt-trans-col-sm.gif
chpc_jira_heading.png
chpc_jira_heading.psd
chpc_logo_block.png
chpclogo1_wtxt.gif

manuals

faq

getting_started

hardware

software
C.html
Fortran.html
OpenBabel.html
PathscaleUserGuide.pdf
amber.html
atlas.html
autodock.html
blast.html
bmdp.html
cambridge.html
code
VT_ex.c
cblacs.h
ex1.c
ex2.c
ex3.c
ex4.c
ex5.f
ex_pvfs.c
g03_clusters.script
g03_icebox.script
g03_sierra.script
g98_icebox.script
g98_icebox2.script
g98_icebox3.script
g98_icebox_global.script
g98_icebox_local.script
g98_icebox_shmem.script
g98_sierra.script
gamess_arches.script
hello.c
mpiblast.script
nwchem_arches.script
nwchem_cluster.script
nwchem_icebox.script
nwchem_sierra.script
rn_eman.scr
rnamber_arches
rnamber_da_p
rnamber_ice
rnamber_ice_p
rnamber_mm_p
rnamber_sda_p
rndalton_arches_serial
rnfluent.script.txt
rng03
rng03_generic_web
rng03_newice_web
rng03_web_arches
rng03_web_icebox
rng03_web_sierra
rng98
rng98_generic_ice_test
rng98_generic_ice_web
rng98_generic_web
rnmolpro_arches_serial
rnnw_sierra_web
scalapk_ice.script
cxml.html
cyana.html
dalton.html
dock.html
ecce.html
g03.html
g98.html
gamess.html
grace.html
gv.html
hlm.html
index_topic.html
lisrel.html
mat_l.html
matlab.html
maui.html
molden.html
molpro.html
mpi-io.html
mpi.html
mpiblast.html
nag.html
nag_example.html
ncarg.html
nwchem.html
par_devel.html
pbs.html
petsc.html
prelis.html
rms.html
sas.html
scalapack.html
screen.html
splus.html
statit.html
sudaan.html
timing.html
totalview.html
uufs
vampir.html

user_guides

news

downtimes

2004

2005
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2006

2007

2008

news_items

2004
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2005
20061108.01.html
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20051108.01.html
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20051012.01.html
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2006
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20060101.01.html
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2007
20070823.01.html
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20070727.01.html
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20070130.01.html
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20070405.01.html
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20070130.01.html
20070116.02.html

2008

newsletters

systemstatus

policies

presentations
CCpkg_chpc_spr08.pdf
Gaussian_chpc_spr08.pdf
IntroPar07.pdf
OverviewCHPCSpring2008.pdf
cs_email
index.cnt~.html
intro_mpi
IntroMPI05a.pdf
IntroMPI06.pdf
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intro_omp
IntroOpenMP04.pdf
IntroOpenMP06.pdf
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mathlibs
MatLib05.pdf
MatLib06.pdf
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mpi-io

mpi-omp

sc2004_arches

totalview
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Totalview04.pdf
Totalview06.pdf

vampir
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TAU06.pdf

research
CHPCBib.html
CHPCBibliography.20051228.pdf
CHPCBibliography.20060427.pdf
CHPCBibliography.20061004.pdf
CHPCBibliography.20070215.pdf
CHPCBibliography.20070323.pdf
CHPCBibliography.20070626.pdf
CHPCBibliography.20071025.pdf
CHPCBibliography.20080425.pdf
CHPCBibliography.pdf
EnNoteGuidedTour.pdf
adapt.pdf
gen-chpc.pdf
meteorology.pdf
posters.html
sanchez.pdf
victor.pdf
services.html
CHPC Documentation
CHPC Getting Started Guide
This guide is for users new to CHPC. It is intended to provide some assistance in getting started, but is not meant to replace any of our other services. It is limited to the policies and use of our High Performance Computing systems and does not address the other areas which are supported by CHPC (desktop support, networking, digital media etc.) We are interested in improving our documentation and in assisting you in your research. Please send any comments or feedback on this guide to issues@chpc.utah.edu.
When you applied for your account you signed and agreed to the following:
In obtaining this account I agree to use the Center for High Performance Computing resources solely for the purposes connected with my University of Utah affiliation and agree not to allow my access to be used in a manner which could permit unauthorized use of the computer. During the use of this account, certain proprietary software may be made available. Availability of said software is for my use only and may not be copied to any other machine(s) or made available to any other person(s).
CHPC is an important but limited resource for University of Utah community. It is CHPC's responsibility to protect these facilities and safeguard their proper use. Because we cannot do this job alone, we depend on your assistance. Responsible use of the system and cooperation on your part helps us maximize availability for you and other researchers.
If CHPC determines that you have not used the CHPC resources in an appropriate fashion, you could lose your account, your current allocation and your ability to qualify for future allocations.
CHPC had several security breaches during the 2004 calendar year and our policy is to take reasonable measures to insure the security of our systems. We also have a policy of maintaining accessibility and ease of use. These two philosophies are sometimes at odds with each other. Our goal is to strike a balance between the two.
We encourage our users to maintain safe passwords, not share their passwords and will lock passwords we find too easy to crack. Please see our security and password policy for details. With our most recent breach in November of 2004 we do not allow access to the systems we maintain via SSH keys.
The first step is to submit a request to CHPC for an account on our systems. You must first fill out the account application form and have it signed by your faculty advisor or PI. We still require hardcopy signatures, so please fill out the online form, print it, sign it, have your advisor sign it and send it into CHPC. You can fax it to (801) 585-5366.
When you receive your HPC account you are given access to all of the High Performance Computing Platforms supported by CHPC. They are available through the ssh (secure shell) utility. We allow only protocol 2 to access our systems and do not allow "ssh keys" for security reasons.
The HPC systems currently supported are:
- Opteron Arches Clusters:
- ssh marchingmen.chpc.utah.edu
- ssh delicatearch.chpc.utah.edu
- ssh tunnelarch.chpc.utah.edu
- ssh sanddunearch.chpc.utah.edu
Your password for all Unix systems and for samba/cifs mounts of fileservers maintained by CHPC is your campus CIS password. Please go to http://gate.acs.utah.edu to change your password.
For windows accounts, your password is maintained separately. You should contact CHPC staff by sending email to issues@chpc.utah.edu for assistance with changing that password.
CHPC provides home directory space which is NFS mounted on all of the HPC systems. This filesystem is not backed up. Users are responsible for moving important data to a more permanent location such as their home department fileserver.
CHPC also provides several layers of scratch on the various HPC platforms we support. Please see the CHPC Disk Usage Policy.
CHPC awards allocations on our systems based on proposals submitted to a review committee. Research groups must submit requests for allocations. Please see the CHPC Accounts and Allocations Policy for detailed information.
Each of the HPC platform has a web based User's Guide which should help you get going on that system. They are:
If after going through these guides and examples you find you are still having difficulty getting going, please contact CHPC by sending a message to issues@chpc.utah.edu stating that you wish to meet with a consultant for some assistance.
All of our documentation is available on the Web (including a FAQ - Frequesntly Asked Questions) which you may browse through it by going to CHPC Documentation.
If you have a question or run into problems, please contact the CHPC Help Desk.
- email: issues@chpc.utah.edu
- Interacting directly with our issue tracking system.
- phone: (801) 581-6440
- Walk-In: 405 INSCC
The best way is by sending email to issues@chpc.utah.edu and stating your question or problem. Please provide as much detail as possible, including your name and contact information, which system you're having trouble with, when the problem occurred and any job numbers, scripts or error messages which apply to the problem.
The CHPC Presentation Series is presented every Fall and again in the Spring. These presentations are designed to help you learn about CHPC, parallel programming, some of the specialized software CHPC supports and other topics we think might assist you in your research. The link to the presentations (above) also has links to the latest slides for the talks along with abstracts about each presentation. Please let us know if you have ideas for presentations you would like added to our series.
We ask that you acknowledge CHPC support on any published work supported by CHPC facilities or staff. Please see our Acknowledging CHPC Policy.


