Documents
CHPC Report 2007 (final).pdf
CHPCReport_2007.pdf
allocations

usage
fall2004.piusage.html
fall2004.userusage.html
fall2005.projusage.html
fall2005.userusage.html
fall2006.projusage.html
fall2006.userusage.html
fall2007.projusage.html
fall2007.userusage.html
icebox_qtd_by_project.html
qtd_by_pi_sierra.html
qtd_by_proj.html
qtd_by_user.html
qtd_by_user_sierra.html
qtd_bypi_sierra.html
spr2005.acctusage.html
spr2005.icebox_project.html
spr2005.piusage.html
spr2005.userusage.html
spr2006.projusage.html
spr2006.userusage.html
spr2007.projusage.html
spr2007.userusage.html
sum2004.piusage.html
sum2004.userusage.html
sum2005.projusage.html
sum2005.userusage.html
sum2006.projusage.html
sum2006.userusage.html
sum2007.projusage.html
sum2007.userusage.html
win2005.acctusage.html
win2005.piusage.html
win2005.userusage.html
win2006.projusage.html
win2006.userusage.html
win2007.projusage.html
win2007.userusage.html
win2008.projusage.html
win2008.userusage.html

forms

logos

logofiles
chpc-withtxt-ltbg-color-lg.jpg
chpc-withtxt-ltbg-color-mac.tif
chpc-withtxt-ltbg-color-med.jpg
chpc-withtxt-ltbg-color-pc.tif
chpc-withtxt-ltbg-color-sm.jpg
chpc-withtxt-ltbg-color.eps
chpc-withtxt-trans-col-lg.gif
chpc-withtxt-trans-col-med.gif
chpc-withtxt-trans-col-sm.gif
chpc_jira_heading.png
chpc_jira_heading.psd
chpc_logo_block.png
chpclogo1_wtxt.gif

manuals

faq

getting_started

hardware

software
C.html
Fortran.html
OpenBabel.html
PathscaleUserGuide.pdf
amber.html
atlas.html
autodock.html
blast.html
bmdp.html
cambridge.html
code
VT_ex.c
cblacs.h
ex1.c
ex2.c
ex3.c
ex4.c
ex5.f
ex_pvfs.c
g03_clusters.script
g03_icebox.script
g03_sierra.script
g98_icebox.script
g98_icebox2.script
g98_icebox3.script
g98_icebox_global.script
g98_icebox_local.script
g98_icebox_shmem.script
g98_sierra.script
gamess_arches.script
hello.c
mpiblast.script
nwchem_arches.script
nwchem_cluster.script
nwchem_icebox.script
nwchem_sierra.script
rn_eman.scr
rnamber_arches
rnamber_da_p
rnamber_ice
rnamber_ice_p
rnamber_mm_p
rnamber_sda_p
rndalton_arches_serial
rnfluent.script.txt
rng03
rng03_generic_web
rng03_newice_web
rng03_web_arches
rng03_web_icebox
rng03_web_sierra
rng98
rng98_generic_ice_test
rng98_generic_ice_web
rng98_generic_web
rnmolpro_arches_serial
rnnw_sierra_web
scalapk_ice.script
cxml.html
cyana.html
dalton.html
dock.html
ecce.html
g03.html
g98.html
gamess.html
grace.html
gv.html
hlm.html
index_topic.html
lisrel.html
mat_l.html
matlab.html
maui.html
molden.html
molpro.html
mpi-io.html
mpi.html
mpiblast.html
nag.html
nag_example.html
ncarg.html
nwchem.html
par_devel.html
pbs.html
petsc.html
prelis.html
rms.html
sas.html
scalapack.html
screen.html
splus.html
statit.html
sudaan.html
timing.html
totalview.html
uufs
vampir.html

user_guides

news

downtimes

2004

2005
20051229.02.html
20051216.01.html
20051209.01.html
20051206.01.html
20051130.01.html
20051108.01.html
20051103.01.html
20051102.01.html
20051012.01.html
20050914.01.html
20050727.01.html
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20050320.02.html
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20050225.01.html
20050224.01.html
20050223.02.html
20050127.01.html
20050112.01.html
20050108.01.html

2006

2007

2008

news_items

2004
20041212.01.html
20041211.01.html
20041210.03.html
20041210.02.html
20041210.01.html
20041209.01.html
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20041117.02.html
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20041112.03.html
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20041110.02.html
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20041008.01.html
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20040827.01.html
20041212.01.html
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20041210.01.html
20041209.01.html
20041206.01.html
20041203.01.html
20041112.01.html

2005
20061108.01.html
20060411.02.html
20051229.02.html
20051229.01.html
20051216.01.html
20051209.01.html
20051206.01.html
20051130.02.html
20051130.01.html
20051124.01.html
20051115.01.html
20051112.01.html
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20051108.02.html
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20050108.01.html
20050105.01.html
20051229.02.html
20051216.01.html
20051209.01.html
20051206.01.html
20051130.01.html
20051108.01.html
20051103.01.html
20051102.01.html
20051012.01.html
20050914.01.html
20050727.01.html
20050714.01.html
20050623.01.html
20050510.01.html
20050507.01.html
20050502.01.html
20050420.01.html
20050409.01.html
20050331.01.html
20050323.01.html
20050320.02.html
20050316.01.html
20050302.01.html
20050225.01.html
20050224.01.html
20050223.02.html
20050127.01.html
20050112.01.html
20050108.01.html

2006
20061121.01.html
20061003.01.html
20060829.01.html
20060811.01.html
20060802.01.html
20060801.01.html
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20060411.01.html
20060323.02.html
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20060303.01.html
20060228.01.html
20060215.01.html
20060101.01.html
20061121.01.html
20061003.01.html
20060829.01.html
20060811.01.html
20060801.01.html
20060712.01.html
20060706.01.html
20060323.02.html
20060323.01.html
20060308.01.html
20060303.01.html
20060215.01.html

2007
20070823.01.html
20070807.01.html
20070727.01.html
20070621.01.html
20070611.01.html
20070604.01.html
20070521.01.html
20070425.01.html
20070411.01.html
20070405.01.html
20070314.01.html
20070206.01.html
20070130.01.html
20070116.02.html
20070116.01.html
20070108.01.html
20071219.01.html
20071129.01.html
20070905.01.html
20070814.01.html
20070604.01.html
20070425.01.html
20070405.01.html
20070314.01.html
20070130.01.html
20070116.02.html

2008

newsletters

systemstatus

policies

presentations
CCpkg_chpc_spr08.pdf
Gaussian_chpc_spr08.pdf
IntroPar07.pdf
OverviewCHPCSpring2008.pdf
cs_email
index.cnt~.html
intro_mpi
IntroMPI05a.pdf
IntroMPI06.pdf
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intro_omp
IntroOpenMP04.pdf
IntroOpenMP06.pdf
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mathlibs
MatLib05.pdf
MatLib06.pdf
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mpi-io

mpi-omp

sc2004_arches

totalview
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Totalview04.pdf
Totalview06.pdf

vampir
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TAU06.pdf

research
CHPCBib.html
CHPCBibliography.20051228.pdf
CHPCBibliography.20060427.pdf
CHPCBibliography.20061004.pdf
CHPCBibliography.20070215.pdf
CHPCBibliography.20070323.pdf
CHPCBibliography.20070626.pdf
CHPCBibliography.20071025.pdf
CHPCBibliography.20080425.pdf
CHPCBibliography.pdf
EnNoteGuidedTour.pdf
adapt.pdf
gen-chpc.pdf
meteorology.pdf
posters.html
sanchez.pdf
victor.pdf
services.html
CHPC Documentation
CHPC News
This section is here to provide the user of an overview and index of what can be found in the News directories.
- News Items: History of all news announcements made by HCPC this year including notifications of presentations, downtimes and policy changes.
- 2007 News Items: History of all news announcements make by CHPC in 2007 including notifications of presentations, downtimes and policy changes.
- 2006 News Items: History of all news announcements make by CHPC in 2006 including notifications of presentations, downtimes and policy changes.
- 2005 News Items: History of all news announcements make by CHPC in 2005 including notifications of presentations, downtimes and policy changes.
- 2004 News Items: History of all news announcements make by CHPC in 2004 including notifications of presentations, downtimes and policy changes.
- Downtimes: Downtimes in the current year.
- 2007 Downtimes: Downtimes in 2007.
- 2006 Downtimes: Downtimes in 2006.
- 2005 Downtimes: Downtimes in 2005.
- 2004 Downtimes: Downtimes in 2004.
- Current System Status: Summary of Current System Status of HPC Systems
- Newsletters: CHPC Newsletters, past and present (PDF and HTML)
Most Recent News Items:
CHPC to Retire /scratch/parallel
Posted: April 30, 2008
Beginning May 1st CHPC will begin the process of retiring the filesystem mounted at /scratch/parallel. As previously announced, we will starting removing the mount of this filesystem on the compute nodes as jobs complete over the next week. Beginning May 1st, DO NOT submit jobs utilizing /scratch/parallel.
On May 9th, 2008 any remaining mounts of /scratch/parallel will be removed from all compute nodes. The filesystem will remain available on the interactive nodes until June 1st.
On June 1st, 2008 the filesystem will be retired. Please move data you wish to keep from the /scratch/parallel filesystem prior to June 1st.
CHPC will be exploring options for parallel filesystems and may deploy something for this purpose in the future.
MPICH2 (for Ethernet upgraded on Arches to version 1.0.7
Posted: April 15, 2008
We have upgraded MPICH2 (for Ethernet) on Arches to version 1.0.7. This is a minor upgrade and as such you should be able to use old executables with the new version. If problem occurs, please, rebuild your program (no changes in Makefiles, etc required). If that does not help, please, let us know.Arches Clusters back after failed hardware in network router
Posted: April 7, 2008
We had a supervisor card fail in our router for the clusters this morning. We were able to replace the failed hardware and get the router healthy again about 1 p.m. after which we reviewed the health of the nodes. Please let us know if you see any problems by sending email to issues@chpc.utah.edu
Spring 2008 CHPC Presentations Series begin this Thursday April 10th
Posted: April 7, 2008
All presentations are held in the INSCC Auditorium.
Overview of CHPC
Date: April 10th, 2008Time: 10:30 a.m.
Introduction to Parallel Computing
Date: April 10th, 2008Time: 1:00 p.m.
Chemistry Packages at CHPC
Date: April 17th, 2008Time: 1:00 p.m.
Using Gaussian03 and Gaussview
Date: April 24th, 2008Time: 1:00 p.m.
For more information please go to CHPC Presentations
Unscheduled Network Outage of arches clusters and telluride - 4/7/2008
Posted: April 7, 2008
Duration: Unknown
Systems Affected/Downtime Timelines: Connectivity of all of the arches clusters and telluride.
We've had a switch go down which affects connectivity to all of the arches clusters and telluride. Our staff are working on the problem. We'll send an update when we know more.Power Restored to INSCC 4/6/2008 about 10:21 a.m.
Posted: April 6, 2008
Full power was restored to the INSCC Building about 10:21 a.m. on April 6th after the planned outage. All CHPC services are online or in the process of being verified. Some INSCC departmental services may be off-line until individual administraters are able to finish bringing up various servers.
The INSCC Rm 275 UPS (used during the outage to maintain file server connectivity to the HPC clusters) did not come back off battery at that time. CHPC staff working with electricians were able to determine and remedy the problem. As of 10:56am, the UPS was fully functional.
Campus electricians report that their work with energizing a new substation was successful.
New scratch space available
Posted: April 4, 2008
A new scratch space is available for computations on the arches clusters. The space is mounted at /scratch/serial and is 16 TB.
Please note that the initial performance of this new space may not be representative of what you'll see in the future. The first, early users may see exceptionally fast performance, but if many users move data and start running jobs, it may perform exceptionally slowly for a time. The performance should stabilize over the next few weeks.
**Important**: We will discontinue mounting the /scratch/parallel space on the compute nodes beginnning May 1st, 2008 but accesss via the interactive nodes will remain for an additional few weeks. Users should migrate all their data off /scratch/parallel as soon as possible.
Power outage this weekend affecting much of lower campus: April 5-6th
Posted: April 1, 2008
Beginning Saturday, April 5th at 11:00 p.m., the power to much of lower campus will be down in order for the electrical shop and contractors to prepare the power grid for a co-generation plant. The estimate for this outage is 24 hours.
The impacts to the INSCC building and INSCC data center (Rm 275):
Desktops and personal space: We recommend tenants of the INSCC building shut down your desktops before you leave for the weekend. We further recommend that any perishables in refrigerators be removed prior to this outage.
System administrators: All equipment in the INSCC data center should be turned off prior to 11 p.m. Saturday. There will be no air conditioning and no power available for servers.
HPC systems: The HPC systems should be able to ride out this outage since they are on another power substation within Research Park . The fileservers and supporting equipment in the SSB data center will be on backup generator power. The two data centers will interconnect via a router on generator power.
The default version of Gaussian is now the new E.01 version (and Gaussview 4).
Posted: March 20, 2008
You may remember I changed to this new version last downtime but there were issues with the use of /scratch/parallel and I moved back to the D.01 version These issues have been resolved so during this downtime I again made this latest version the standard one.
If for any reason you still want to run the D.01 version you will need to update the g03root environment in your batch script to point to it:
setenv g03root /uufs/arches/sys/pkg/gaussian03/D.01
If you have any questions/problems, please contact Anita.


