# .tcshrc for host-specific initialization
# user can turn on/off package initializations for specific hosts
# this is useful for example in case of MPI, where we have 2-3 distributions per cluster
# and user can select the one that he preferes as a default

# please send comments/suggestions to mcuma@chpc.utah.edu
# currently works on all CHPC based clusters (Linux and OSF) and on Linux desktops

#set echo

# Test if UUFSCELL is defined, if not, see if uufs.csh exists and if it does source it - this fixed problems with crontab
if (!($?UUFSCELL) && (-e /etc/profile.d/uufs.csh)) then
   source /etc/profile.d/uufs.csh
endif

if ($?UUFSCELL) then
#UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
# Arches global initialization
  set GRP = `echo $UUFSCELL | cut -d . -f 2`
  if ( ($GRP == "arches") || ($GRP == "bridges") || ($GRP == "peaks") ) then

# exit if .tcshrc was loaded by a parent shell
# execute this only on the clusters since on desktops env. var. stays defined
# for all new terminals# update Jan11 - screen does not inherit parent's LD_LIBRARY_PATH so if in screen, 
# load up the whole environment again - here we risk that the PATH will become too long though
      if ( $?TCSHRC_LOADED ) then
       if !($?TERM) exit
       if ($TERM != "screen" ) exit
      endif
#      if ( $?TCSHRC_LOADED ) exit
      setenv TCSHRC_LOADED 1
#

# stacksize by default is very small, which causes programs with large static data to segfault
      limit stacksize unlimited
#      limit coredumpsize unlimited

# create .pbs_spool if not created already
      if (!(-d $HOME/.pbs_spool)) mkdir $HOME/.pbs_spool

# default path addon
      setenv PATH "/uufs/chpc.utah.edu/sys/bin:/uufs/$UUFSCELL/sys/bin:$PATH"
      if !($?MANPATH) then
        setenv MANPATH /uufs/chpc.utah.edu/sys/man:/uufs/$UUFSCELL/sys/man:`manpath`
      else 
        setenv MANPATH "/uufs/chpc.utah.edu/sys/man:/uufs/$UUFSCELL/sys/man:$MANPATH"
      endif

# Commenting/uncommenting source lines below will disable/enable specified packages
# Packages not specified do not require shell modifications, but you may have to point
# to /uufs/landscape.arches/sys/bin, lib or include in order to use them

#source PGI defines
      source /uufs/chpc.utah.edu/sys/pkg/pgi/std/etc/pgi.csh

#source Intel compilers environment - includes icc, ifort, mkl, idb, tbb
      source /uufs/chpc.utah.edu/sys/pkg/intel/ics/bin/compilervars.csh intel64

# Totalview
      source /uufs/chpc.utah.edu/sys/pkg/totalview/std/etc/totalview.csh

# Matlab
       source /uufs/chpc.utah.edu/sys/pkg/matlab/std/etc/matlab.csh

# TAU
#       source /uufs/chpc.utah.edu/sys/pkg/tau/std/etc/tau.csh
# ITA
#       source /uufs/arches/sys/pkg/ita/std/etc/ita.csh

# NWCHEM
#        source /uufs/chpc.utah.edu/sys/nwchem/etc/nwchem.csh

#Babel
#        source /uufs/chpc.utah.edu/sys/openbabel/etc/babel.csh

#Molpro
#        source /uufs/chpc.utah.edu/sys/molpro-serial/etc/molpro.csh

#Dalton
#        source /uufs/chpc.utah.edu/sys/dalton-serial/etc/dalton.csh

#Dock
#       source /uufs/chpc.utah.edu/sys/pkg/dock/etc/dock.csh

#Autodock
#       source /uufs/chpc.utah.edu/sys/pkg/autodock/etc/autodock.csh

# Cambridge Structural Database
#       source /uufs/chpc.utah.edu/sys/pkg/CSD/std/cambridge/etc/csd.csh

# VMD
#      setenv PATH "/uufs/chpc.utah.edu/sys/pkg/vmd/vmd-std/bin:$PATH"

  endif

# Follow specific cluster initializations
#---------------------------------------------------------------------
# Do Ember specific initializations
    if ($UUFSCELL == "ember.arches") then
      source /uufs/chpc.utah.edu/sys/pkg/pgi/std_rh6/etc/pgi.csh
# MVAPICH2 is the preferred MPI on Ember
      source /uufs/ember.arches/sys/pkg/mvapich2/std_intel/etc/mvapich2.csh
# Another option is to use OpenMPI
#      source /uufs/ember.arches/sys/pkg/openmpi/std_intel/etc/openmpi.csh

# GAUSSIAN09 - uncomment if you are a gaussian user!
#        source /uufs/chpc.utah.edu/sys/pkg/gaussian09/EM64T/etc/g09.csh
#------------------------------------------------------------------------------
# Do Kingspeak specific initializations
    else if ($UUFSCELL == "kingspeak.peaks") then

      source /uufs/chpc.utah.edu/sys/pkg/pgi/std_rh6/etc/pgi.csh
# source mpich2 defines
      source /uufs/kingspeak.peaks/sys/pkg/mvapich2/std/etc/mvapich2.csh

# GAUSSIAN09 - uncomment if you are a gaussian user!
#        source /uufs/chpc.utah.edu/sys/pkg/gaussian09/EM64T/etc/g09.csh
#------------------------------------------------------------------------------
# Do Lonepeak specific initializations
    else if ($UUFSCELL == "lonepeak.peaks") then

# source PGI, different on RHEL6
      source /uufs/chpc.utah.edu/sys/pkg/pgi/std_rh6/etc/pgi.csh
# source mpich2 defines
      source /uufs/chpc.utah.edu/sys/pkg/mpich2/std/etc/mpich2.csh

# GAUSSIAN09 -  uncomment if a gaussian user
#     source /uufs/chpc.utah.edu/sys/pkg/gaussian09/EM64TL/etc/g09.csh

#---------------------------------------------------------------------
# Do Ash specific initializations
    else if ($UUFSCELL == "ash.peaks") then

# source PGI, different on RHEL6
      source /uufs/chpc.utah.edu/sys/pkg/pgi/std_rh6/etc/pgi.csh
# source mpich2 defines
      source /uufs/ash.peaks/sys/pkg/mvapich2/std/etc/mvapich2.csh

# GAUSSIAN09 - uncomment if you are a gaussian user!
#        source /uufs/chpc.utah.edu/sys/pkg/gaussian09/EM64T/etc/g09.csh
#---------------------------------------------------------------------
# do turretarch specific initializations
    else if ($UUFSCELL == "turretarch.arches") then
    
      setenv SSIHLM /uufs/turretarch.arches/sys/pkg/hlm/std

#---------------------------------------------------------------------
# do hiddenarch specific initializations
    else if ($UUFSCELL == "hiddenarch.arches") then
    
      set met_include=met_include.csh

#      if ($?TERM != 0) then
        wget -q -T 4 -O ~/$met_include http://www.chpc.utah.edu/docs/manuals/getting_started/code/$met_include
#     curl times out correctly, but is not present on Icebox
#         curl --connect-timeout 5 http://155.101.3.221/for_users/scripts/$ips_file -o ~/$ips_file
#      endif  

      set file_length=`wc -l ~/$met_include | cut -f1 -d/`		# Count Lines
      @ fl = `expr $file_length + 0`			# Change Type

#     in case transfer failed (file is there but size 0), get backup file
      if (-e ~/$met_include && $fl == 0) then
        cp ~/$met_include.bak ~/$met_include
        set file_length=`wc -l ~/$met_include | cut -f1 -d/`         # Count Lines
        @ fl = `expr $file_length + 0`                        # Change Type
      endif

#   a in case we did find met_include, back it up and source it
      if (-e ~/$met_include && $fl > 0) then
         cp ~/$met_include ~/$met_include.bak
         source ~/$met_include
      endif

# Do Telluride specific initializations
    else if ($UUFSCELL == "telluride.arches") then

      setenv MPI_SHELL /usr/bin/rsh

# GAUSSIAN09
#       source /uufs/chpc.utah.edu/sys/pkg/gaussian09/EM64TL/etc/g09.csh

#---------------------------------------------------------------------
# Do Apex arch (HIPPA cluster) specific initializations
    else if ($UUFSCELL == "apexarch.bridges") then

# source MPICH2 defines
# this causes problems with FastX connect
#      source /uufs/chpc.utah.edu/sys/pkg/mpich2/std/etc/mpich2.csh
#      set prompt="HIPPA:%B%c2%b%#%"   # command prompt

    endif
#---------------------------------------------------------------------
# do turretarch specific initializations
    if ($UUFSCELL == "turretarch.arches") then
#      setenv SSIHLM /uufs/turretarch.arches/sys/pkg/hlm/std
      source /uufs/chpc.utah.edu/sys/pkg/mpich2/std_pgi/etc/mpich2.csh
    endif

#---------------------------------------------------------------------
# do astro.utah.edu specific initializations
    if ($UUFSCELL == "astro.utah.edu") then
      limit stacksize unlimited
# default path addon
      setenv PATH "/uufs/$UUFSCELL/sys/bin:$PATH"
      if !($?MANPATH) then
        setenv MANPATH /uufs/$UUFSCELL/sys/man:`manpath`
      else 
        setenv MANPATH "/uufs/$UUFSCELL/sys/man:$MANPATH"
      endif
# source MPICH2 defines
      source /uufs/chpc.utah.edu/sys/pkg/mpich2/std/etc/mpich2.csh
# source IDL
      source /uufs/chpc.utah.edu/sys/pkg/idl/7.0/etc/idl.csh
      source /uufs/astro.utah.edu/sys/pkg/sm/std/etc/sm.csh

    endif
#---------------------------------------------------------------------
# do stats specific initializations
    if ($UUFSCELL == "stats") then
      limit stacksize unlimited
# default path addon
      setenv PATH "/uufs/$UUFSCELL/sys/bin:$PATH"
    endif
#---------------------------------------------------------------------
# do chpc.utah.edu desktops specific initializations
    if ($UUFSCELL == "chpc.utah.edu") then
      limit stacksize unlimited
# default path addon
      setenv PATH "/uufs/$UUFSCELL/sys/bin:$PATH"
      if !($?MANPATH) then
        setenv MANPATH /uufs/$UUFSCELL/sys/man:`manpath`
      else 
        setenv MANPATH "/uufs/$UUFSCELL/sys/man:$MANPATH"
      endif
#source PGI defines
      source /uufs/$UUFSCELL/sys/pkg/pgi/std/etc/pgi.csh

#source Pathscale defines
      source /uufs/$UUFSCELL/sys/pkg/pscale/std/etc/pscale.csh

#source Intel compilers environment - includes icc, ifort, mkl, idb, tbb
      source /uufs/chpc.utah.edu/sys/pkg/intel/ics/bin/compilervars.csh intel64

# Totalview
      source /uufs/$UUFSCELL/sys/pkg/totalview/std/etc/totalview.csh

# Matlab
      source /uufs/$UUFSCELL/sys/pkg/matlab/std/etc/matlab.csh

      set met_include=met_include.csh
   
      wget -q -T 4 -O ~/$met_include http://www.chpc.utah.edu/docs/manuals/getting_started/code/$met_include
 #     curl times out correctly, but is not present on Icebox
 #         curl --connect-timeout 5 http://155.101.3.221/for_users/scripts/$ips_file -o ~/$ips_file
   
      set file_length=`wc -l ~/$met_include | cut -f1 -d/`                # Count Lines
      @ fl = `expr $file_length + 0`                      # Change Type
   
 #     in case transfer failed (file is there but size 0), get backup file
      if (-e ~/$met_include && $fl == 0) then
        cp ~/$met_include.bak ~/$met_include
        set file_length=`wc -l ~/$met_include | cut -f1 -d/`         # Count Lines
        @ fl = `expr $file_length + 0`                        # Change Type
      endif
#   a in case we did find met_include, back it up and source it
      if (-e ~/$met_include && $fl > 0) then
         cp ~/$met_include ~/$met_include.bak
         source ~/$met_include
      endif
    endif
#---------------------------------------------------------------------
# do CEMI desktops specific initializations
    if ($UUFSCELL == "cemi") then
      limit stacksize unlimited

#source PGI defines
      source /uufs/chpc.utah.edu/sys/pkg/mpich2/std_rh6/etc/mpich2.csh

#source PGI defines
      source /uufs/chpc.utah.edu/sys/pkg/pgi/std/etc/pgi.csh

#source Intel compilers environment
#      source /uufs/chpc.utah.edu/sys/pkg/intel/ifort/std/bin/ifortvars.csh 
#      source /uufs/chpc.utah.edu/sys/pkg/intel/icc/std/bin/iccvars.csh 
      source /uufs/chpc.utah.edu/sys/pkg/intel/ics/bin/compilervars.csh intel64

# Totalview
      source /uufs/chpc.utah.edu/sys/pkg/totalview/std/etc/totalview.csh

# Matlab
      source /uufs/chpc.utah.edu/sys/pkg/matlab/std/etc/matlab.csh

# COMSOL
      setenv PATH "/uufs/chpc.utah.edu/sys/pkg/comsol/std/bin:$PATH"

    endif

# end of UUFSCELL initializations
#UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
else

# below define your own machine(s), in case they mount your home on the same fileserver
# as the CHPC machines
#  set echo
  set MYMACHINE

# find out what OS we are running, inits are specific for those because
# hostname uses different flags to return useful data based on the OS
  set MYOS = `uname`

######################################################################
# Start machine specific initializations
######################################################################

#---------------------------------------------------------------------
# Do Linux specific initializations
#---------------------------------------------------------------------
  if ($MYOS == "Linux") then

#   Find host-specific string. It is first 3 numbers of the host's IP
      set MYHOST = `hostname -i | cut -f 1-3 -d .`
#   Problem with Arches is, that all login nodes are on 172.17.10 net
#   we also save full IP and test if it's not one of the 6 login nodes
#   This is also used for user specified machine (e.g. desktop mounting 
#   file server as a home)
      set MYIP = `hostname -i`

#   define hosts
#   for other (Linux) hosts, define a string with IP range here

#   we are getting the IP host list from CHPC's webserver
#   this enables us to change the IPs of the machines if necessary without
#   breaking this script
#   Sierra does not have wget, so, we have to do this inside Linux
#   Myrinet's mpirun complains about unknown vars. ICEBOX1,... - probably 
#   does not source the file, but, direct ssh works OK
#   when disable wget and linuxips.sh is there, all is good
#   but then, sometimes all is good even with wget

    set ips_file=linuxips.csh

#    if ($?TERM != 0) then
#   Icebox nodes don't run name services, use webserver IP
      wget -q -T 4 -O ~/$ips_file http://www.chpc.utah.edu/for_users/scripts/$ips_file
#   curl times out correctly, but is not present on Icebox
#       curl --connect-timeout 5 http://155.101.3.221/for_users/scripts/$ips_file -o ~/$ips_file
#    endif  

    set file_length=`wc -l ~/$ips_file | cut -f1 -d/`		# Count Lines
    @ fl = `expr $file_length + 0`			# Change Type

#   in case transfer failed (file is there but size 0), get backup file
    if (-e ~/$ips_file && $fl == 0) then
      cp ~/$ips_file.bak ~/$ips_file
      set file_length=`wc -l ~/$ips_file | cut -f1 -d/`         # Count Lines
      @ fl = `expr $file_length + 0`                        # Change Type
    endif

#   a long if section in case we did find linux.ips,
    if (-e ~/$ips_file && $fl > 0) then
       cp ~/$ips_file ~/$ips_file.bak
       source ~/$ips_file
    endif 

#   add user-specific host IPs
    set PORTAL="155.101.3.217"

#-------------------------------------------------------------------------------
# Do Skylinearch specific initializations
    if (($MYHOST == $SARCH)||($MYIP == $SARCHL)) then
# stacksize by default is very small, which causes programs with large static data to segfault
      limit stacksize unlimited

      setenv CLUSTER skylinearch.arches

# create .pbs_spool if not created already
      if (!(-d $HOME/.pbs_spool)) mkdir $HOME/.pbs_spool

# default path addon
      setenv PATH "/uufs/$CLUSTER/sys/bin:$PATH"
      setenv MANPATH "/uufs/$CLUSTER/sys/man"

#source Pathscale defines 
      source /uufs/$CLUSTER/sys/pkg/pscale/std/etc/pscale.csh

# source MPICH2 defines
      source /uufs/$CLUSTER/sys/pkg/mpich2/std/etc/mpich2.csh

#--------------------------------------------------------------------------------------
# Do Portal specific initializations
    else if ($MYHOST == $PORTAL) then

      set autofill

# additional user customizations below here


#--------------------------------------------------------------------------------------
# Do MYMACHINE specific initializations
    else if ($MYIP == $MYMACHINE) then
# additional user customizations below here

    else
#    echo Dont know this computer
    endif

# if the IP file list was not found, we skipped all host specific init
  else
     if ($?TERM != 0) then
       echo "No IP alias file found, most likely due to CHPC webserver being down"
       echo "No host-specific environment is defined in this session"
     endif
  endif

#---------------------------------------------------------------------
# Do OSF (Sierra) specific initializations
#---------------------------------------------------------------------
else if ($MYOS == "OSF1") then

  set SIERRA sierra

# Find host-specific string. It is first 6 characters of the host name for OSF
  set MYHOST = `hostname | cut -c 1-6`

#---------------------------------------------------------------------
# Do Sierra specific initializations
  if ($MYHOST == $SIERRA) then
# echo I am on Sierra
    setenv PATH "/uufs/sierra/sys/pkg/tv/std/bin:$PATH"
  endif

endif
#UUFSCELL else endif
endif

# User defined global terminal customizations valid also for non-interactive 
# terminals (PBS, MPI, cron)

# Get out if terminal is not interactive or we're a root
if ($?USER == 0 || $?TERM == 0) then
    exit
endif

# User defined global terminal customizations valid only on interactive terminals

set autolist                # list completions when the tab key is hit
#load aliases
#source ~/.aliases

if ( `groups $USER | grep " sdss"` != "" ) then
  source /uufs/chpc.utah.edu/sys/pkg/modules/init/tcsh
endif