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News History...

 electrodeLocalizations

Cortical Surface Electrode Localization Uncertainty

By Chantel M. Charlebois1,2, Kimia Shayestehfard3, Daria Nesterovich Anderson1,2, Andrew Janson1,2, Jeneva Cronin4, Moritz Dannhauer2, David Caldwell4, Sumientra Rempersad3, Larry Sorenson4, Jeff Ojemann5, Dana Brooks3, Rob MacLeod1,2, Christopher R. Butson1,2, Alan Dorval1

1Department of Biomedical Engineering; 2Scientific Computing and Imaging (SCI) Institute, University of Utah; 3Department of Electrical & Computer Engineering, Northeastern University; 4Department of Bioengineering; 5Department of Neurological Surgery, University of Washington

Electrocorticography (ECoG) is an invasive technique commonly used to monitor patients with intractable epilepsy to aid in seizure onset localization and eloquent cortex mapping. Modeling accurate electrode locations is necessary to make predictions about stimulation of seizure focus localization.

  • Brain shift occurs after surgical implantation of the ECoG array. When the post-operative CT is co-registered to the pre-operative MRI the electrodes appear to be inside the brain instead of on the cortical surface
  • The electrode localization and projection to the cortical surface are based off of thresholding the CT. CT acquisition between patients and centers differs, therefore we want to use a threshold that is insensitive to these differences

Aim: Determine if the CT threshold range affects electrode localization and the resulting simulation of clinical ECoG measurements during stimulation.

We created three finite element meshes with the three different electrode localizations based on their threshold range and solved the bioelectric field problem for bipolar stimulation between electrodes 18 (0.5 mA source) and 23 (-0.5 mA sink), shown in above image. We compared simulations for three different electrode-localizations based on a small, medium, and large CT threshold range to clinical recordings. The three threshold models did not have large voltage differences when simulating clinical stimulation. Moving forward, we can use any of the threshold ranges because they did not greatly differ in their simulation solutions. This insensitivity to the threshold range gives us more confidence in the electrode locations of our models.

Support from a Joint US (NFS) German (DRG) Collaborative Research in Computational Neuroscience grant, IIS-1515168; an NSF CAREER award, 1351112; and an NIH P 41, GM103545, "Center for Integrative Biomedical Computing".

System Status

General Environment

last update: 2024-04-19 02:33:03
General Nodes
system cores % util.
kingspeak 944/972 97.12%
notchpeak 2793/3212 86.96%
lonepeak 3140/3140 100%
Owner/Restricted Nodes
system cores % util.
ash 1144/1152 99.31%
notchpeak 18082/18328 98.66%
kingspeak 3096/5340 57.98%
lonepeak 60/416 14.42%

Protected Environment

last update: 2024-04-19 02:30:05
General Nodes
system cores % util.
redwood 200/616 32.47%
Owner/Restricted Nodes
system cores % util.
redwood 757/6200 12.21%


Cluster Utilization

Last Updated: 2/20/24